[orx-kdtree] Make orx-kdtree a multiplatform module

This commit is contained in:
Edwin Jakobs
2024-01-02 18:13:14 +01:00
parent a1e75269b1
commit 3b57c3ce26
11 changed files with 305 additions and 214 deletions

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@@ -51,6 +51,7 @@ kotest-framework-engine = { group = "io.kotest", name = "kotest-framework-engine
openrndr-application = { group = "org.openrndr", name = "openrndr-application", version.ref = "openrndr" }
openrndr-extensions = { group = "org.openrndr", name = "openrndr-extensions", version.ref = "openrndr" }
openrndr-math = { group = "org.openrndr", name = "openrndr-math", version.ref = "openrndr" }
openrndr-utils = { group = "org.openrndr", name = "openrndr-utils", version.ref = "openrndr" }
openrndr-shape = { group = "org.openrndr", name = "openrndr-shape", version.ref = "openrndr" }
openrndr-draw = { group = "org.openrndr", name = "openrndr-draw", version.ref = "openrndr" }
openrndr-event = { group = "org.openrndr", name = "openrndr-event", version.ref = "openrndr" }

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@@ -5,16 +5,16 @@ Fast search of points closest to the queried point in a data set. 2D, 3D and 4D.
<!-- __demos__ -->
## Demos
### DemoKNearestNeighbour01
[source code](src/demo/kotlin/DemoKNearestNeighbour01.kt)
[source code](src/jvmDemo/kotlin/DemoKNearestNeighbour01.kt)
![DemoKNearestNeighbour01Kt](https://raw.githubusercontent.com/openrndr/orx/media/orx-kdtree/images/DemoKNearestNeighbour01Kt.png)
### DemoNearestNeighbour01
[source code](src/demo/kotlin/DemoNearestNeighbour01.kt)
[source code](src/jvmDemo/kotlin/DemoNearestNeighbour01.kt)
![DemoNearestNeighbour01Kt](https://raw.githubusercontent.com/openrndr/orx/media/orx-kdtree/images/DemoNearestNeighbour01Kt.png)
### DemoRangeQuery01
[source code](src/demo/kotlin/DemoRangeQuery01.kt)
[source code](src/jvmDemo/kotlin/DemoRangeQuery01.kt)
![DemoRangeQuery01Kt](https://raw.githubusercontent.com/openrndr/orx/media/orx-kdtree/images/DemoRangeQuery01Kt.png)

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@@ -1,15 +1,23 @@
import org.jetbrains.kotlin.gradle.tasks.KotlinCompile
plugins {
org.openrndr.extra.convention.`kotlin-jvm`
org.openrndr.extra.convention.`kotlin-multiplatform`
}
tasks.withType<KotlinCompile> {
kotlinOptions.freeCompilerArgs = listOf("-opt-in=kotlin.RequiresOptIn")
kotlin {
sourceSets {
val commonMain by getting {
dependencies {
implementation(libs.openrndr.application)
api(libs.openrndr.math)
implementation(libs.kotlin.coroutines)
api(libs.openrndr.utils)
}
}
}
}
dependencies {
implementation(libs.openrndr.application)
implementation(libs.openrndr.math)
implementation(libs.kotlin.coroutines)
}
//tasks.withType<KotlinCompile> {
// kotlinOptions.freeCompilerArgs = listOf("-opt-in=kotlin.RequiresOptIn")
//}

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@@ -1,45 +1,10 @@
package org.openrndr.extra.kdtree
import kotlinx.coroutines.*
import org.openrndr.math.*
import java.util.*
import kotlin.IllegalStateException
import org.openrndr.collections.PriorityQueue
import kotlin.math.abs
/** built-in mapper for [Vector2] */
fun vector2Mapper(v: Vector2, dimension: Int): Double {
return when (dimension) {
0 -> v.x
else -> v.y
}
}
fun intVector2Mapper(v: IntVector2, dimension: Int): Double {
return when (dimension) {
0 -> v.x.toDouble()
else -> v.y.toDouble()
}
}
/** built-in mapper for [Vector3] */
fun vector3Mapper(v: Vector3, dimension: Int): Double {
return when (dimension) {
0 -> v.x
1 -> v.y
else -> v.z
}
}
/** built-in mapper for [Vector4] */
fun vector4Mapper(v: Vector4, dimension: Int): Double {
return when (dimension) {
0 -> v.x
1 -> v.y
2 -> v.z
else -> v.w
}
}
class KDTreeNode<T>(val dimensions: Int, val mapper: (T, Int) -> Double) {
var parent: KDTreeNode<T>? = null
@@ -76,8 +41,7 @@ class KDTreeNode<T>(val dimensions: Int, val mapper: (T, Int) -> Double) {
"median=" + median +
", item=" + item +
", dimension=" + dimension +
", children=" + Arrays.toString(children) +
", children=" + children.joinToString(", ") { it.toString() } +
"} " + super.toString()
}
}
@@ -95,82 +59,8 @@ private fun <T> insertItem(root: KDTreeNode<T>, item: T): KDTreeNode<T> {
}
}
expect fun <T> buildKDTree(items: MutableList<T>, dimensions: Int, mapper: (T, Int) -> Double): KDTreeNode<T>
@OptIn(DelicateCoroutinesApi::class)
fun <T> buildKDTree(items: MutableList<T>, dimensions: Int, mapper: (T, Int) -> Double): KDTreeNode<T> {
val root = KDTreeNode<T>(dimensions, mapper)
fun <T> buildTreeTask(
scope: CoroutineScope,
node: KDTreeNode<T>,
items: MutableList<T>,
dimensions: Int,
levels: Int,
mapper: (T, Int) -> Double
): KDTreeNode<T> {
if (items.size > 0) {
val dimension = levels % dimensions
val values = ArrayList<T>()
for (item in items) {
values.add(item)
}
node.dimension = dimension
val median = selectNth(items, items.size / 2) { mapper(it, dimension) }
val leftItems = mutableListOf<T>()
val rightItems = mutableListOf<T>()
node.median = mapper(median, dimension)
node.item = median
for (item in items) {
if (item === median) {
continue
}
if (mapper(item, dimension) < node.median) {
leftItems.add(item)
} else {
rightItems.add(item)
}
}
// validate split
if (leftItems.size + rightItems.size + 1 != items.size) {
throw IllegalStateException("left: ${leftItems.size}, right: ${rightItems.size}, items: ${items.size}")
}
if (leftItems.size > 0) {
node.children[0] = KDTreeNode(dimensions, mapper)
node.children[0]?.let {
it.parent = node
scope.launch {
buildTreeTask(scope, it, leftItems, dimensions, levels + 1, mapper)
}
}
}
if (rightItems.size > 0) {
node.children[1] = KDTreeNode(dimensions, mapper)
node.children[1]?.let {
it.parent = node
scope.launch {
buildTreeTask(scope, it, rightItems, dimensions, levels + 1, mapper)
}
}
}
}
return node
}
val job = GlobalScope.launch {
buildTreeTask(this, root, items, dimensions, 0, mapper)
}
runBlocking {
job.join()
}
return root
}
private fun <T> sqrDistance(left: T, right: T, dimensions: Int, mapper: (T, Int) -> Double): Double {
@@ -184,20 +74,18 @@ private fun <T> sqrDistance(left: T, right: T, dimensions: Int, mapper: (T, Int)
}
fun <T> findAllNodes(root: KDTreeNode<T>): List<KDTreeNode<T>> {
val stack = Stack<KDTreeNode<T>>()
val all = ArrayList<KDTreeNode<T>>()
stack.push(root)
val stack = mutableListOf<KDTreeNode<T>>()
val all = mutableListOf<KDTreeNode<T>>()
stack.add(root)
while (!stack.isEmpty()) {
val node = stack.pop()
// if (node.item != null /*&& !visited.contains(node.children[1])*/) {
val node = stack.removeLast()
all.add(node)
// }
if (node.children[0] != null /*&&!visited.contains(node.children[0])*/) {
stack.push(node.children[0])
if (node.children[0] != null) {
stack.add(node.children[0] !!)
}
if (node.children[1] != null) {
stack.push(node.children[1])
stack.add(node.children[1] !!)
}
}
return all
@@ -229,16 +117,16 @@ fun <T> findKNearest(
val distance = sqrDistance(query, node.item ?: error("item is null"), node.dimensions, node.mapper)
if (includeQuery || node.item !== query) {
if (queue.size < k || distance < queue.peek().second) {
if (queue.size() < k || distance < queue.peek().second) {
queue.add(Pair(node, distance))
if (queue.size > k) {
if (queue.size() > k) {
queue.poll()
}
}
}
val d = abs(node.median - dimensionValue)
if (queue.size < k || d * d < queue.peek().second) {
if (queue.size() < k || d * d < queue.peek().second) {
nearest(node.children[1 - route])
}
}
@@ -253,7 +141,7 @@ fun <T> findKNearest(
}
private fun <T> findNearest(root: KDTreeNode<T>, query: T, includeQuery: Boolean = false): T? {
var nearest = java.lang.Double.POSITIVE_INFINITY
var nearest = Double.POSITIVE_INFINITY
var nearestArg: KDTreeNode<T>? = null
fun nearest(node: KDTreeNode<T>?) {
@@ -309,10 +197,10 @@ private fun <T> findAllInRadius(
}
val route: Int = if ((dimensionValue < node.median || node.children[1]==null) && node.children[0] != null ) {
queue.add(node.children[0])
queue.add(node.children[0]!!)
0
} else if (node.children[1] != null) {
queue.add(node.children[1])
queue.add(node.children[1]!!)
1
} else {
-1
@@ -333,18 +221,18 @@ private fun <T> findAllInRadius(
}
private fun <T> insert(root: KDTreeNode<T>, item: T, dimensions: Int, mapper: (T, Int) -> Double): KDTreeNode<T> {
val stack = Stack<KDTreeNode<T>>()
stack.push(root)
val stack = mutableListOf<KDTreeNode<T>>()
stack.add(root)
dive@ while (true) {
val node = stack.peek()
val node = stack.last()
val value = mapper(item, node.dimension)
if (value < node.median) {
if (node.children[0] != null) {
stack.push(node.children[0])
stack.add(node.children[0]!!)
} else {
// sit here
node.children[0] = KDTreeNode(dimensions, mapper)
@@ -356,7 +244,7 @@ private fun <T> insert(root: KDTreeNode<T>, item: T, dimensions: Int, mapper: (T
}
} else {
if (node.children[1] != null) {
stack.push(node.children[1])
stack.add(node.children[1]!!)
} else {
// sit here
node.children[1] = KDTreeNode(dimensions, mapper)
@@ -387,27 +275,27 @@ private fun <T> remove(toRemove: KDTreeNode<T>, mapper: (T, Int) -> Double): KDT
toRemove.item = null
}
} else {
val stack = Stack<KDTreeNode<T>>()
val stack = mutableListOf<KDTreeNode<T>>()
var branch = 0
if (toRemove.children[0] != null) {
stack.push(toRemove.children[0])
stack.add(toRemove.children[0]!!)
branch = 0
} else {
stack.push(toRemove.children[1])
stack.add(toRemove.children[1]!!)
branch = 1
}
var minValue: Double = java.lang.Double.POSITIVE_INFINITY
var maxValue: Double = java.lang.Double.NEGATIVE_INFINITY
var minValue: Double = Double.POSITIVE_INFINITY
var maxValue: Double = Double.NEGATIVE_INFINITY
var minArg: KDTreeNode<T>? = null
var maxArg: KDTreeNode<T>? = null
while (!stack.isEmpty()) {
val node = stack.pop() ?: throw RuntimeException("null on stack")
val node = stack.removeLast()
val value = mapper(node.item ?: throw IllegalStateException("item is null"), toRemove.dimension)
val value = mapper(node.item ?: error("item is null"), toRemove.dimension)
if (value < minValue) {
minValue = value
@@ -421,27 +309,27 @@ private fun <T> remove(toRemove: KDTreeNode<T>, mapper: (T, Int) -> Double): KDT
if (node.dimension != toRemove.dimension) {
if (node.children[0] != null) {
stack.push(node.children[0])
stack.add(node.children[0]!!)
}
if (node.children[1] != null) {
stack.push(node.children[1])
stack.add(node.children[1]!!)
}
} else {
if (branch == 1) {
if (node.children[0] != null) {
stack.push(node.children[0])
stack.add(node.children[0]!!)
} else {
if (node.children[1] != null) {
stack.push(node.children[1])
stack.add(node.children[1]!!)
}
}
}
if (branch == 0) {
if (node.children[1] != null) {
stack.push(node.children[1])
stack.add(node.children[1]!!)
} else {
if (node.children[0] != null) {
stack.push(node.children[0])
stack.add(node.children[0]!!)
}
}
}
@@ -462,21 +350,3 @@ private fun <T> remove(toRemove: KDTreeNode<T>, mapper: (T, Int) -> Double): KDT
}
return null
}
@JvmName("kdTreeVector2")
fun Iterable<Vector2>.kdTree(): KDTreeNode<Vector2> {
val items = this.toMutableList()
return buildKDTree(items, 2, ::vector2Mapper)
}
@JvmName("kdTreeVector3")
fun Iterable<Vector3>.kdTree(): KDTreeNode<Vector3> {
val items = this.toMutableList()
return buildKDTree(items, 3, ::vector3Mapper)
}
@JvmName("kdTreeVector4")
fun Iterable<Vector4>.kdTree(): KDTreeNode<Vector4> {
val items = this.toMutableList()
return buildKDTree(items, 4, ::vector4Mapper)
}

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@@ -0,0 +1,61 @@
package org.openrndr.extra.kdtree
import org.openrndr.math.Vector2
import org.openrndr.math.IntVector2
import org.openrndr.math.Vector3
import org.openrndr.math.Vector4
import kotlin.jvm.JvmName
/** built-in mapper for [Vector2] */
fun vector2Mapper(v: Vector2, dimension: Int): Double {
return when (dimension) {
0 -> v.x
else -> v.y
}
}
fun intVector2Mapper(v: IntVector2, dimension: Int): Double {
return when (dimension) {
0 -> v.x.toDouble()
else -> v.y.toDouble()
}
}
/** built-in mapper for [Vector3] */
fun vector3Mapper(v: Vector3, dimension: Int): Double {
return when (dimension) {
0 -> v.x
1 -> v.y
else -> v.z
}
}
/** built-in mapper for [Vector4] */
fun vector4Mapper(v: Vector4, dimension: Int): Double {
return when (dimension) {
0 -> v.x
1 -> v.y
2 -> v.z
else -> v.w
}
}
@JvmName("kdTreeVector2")
fun Iterable<Vector2>.kdTree(): KDTreeNode<Vector2> {
val items = this.toMutableList()
return buildKDTree(items, 2, ::vector2Mapper)
}
@JvmName("kdTreeVector3")
fun Iterable<Vector3>.kdTree(): KDTreeNode<Vector3> {
val items = this.toMutableList()
return buildKDTree(items, 3, ::vector3Mapper)
}
@JvmName("kdTreeVector4")
fun Iterable<Vector4>.kdTree(): KDTreeNode<Vector4> {
val items = this.toMutableList()
return buildKDTree(items, 4, ::vector4Mapper)
}

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@@ -0,0 +1,71 @@
package org.openrndr.extra.kdtree
actual fun <T> buildKDTree(items: MutableList<T>, dimensions: Int, mapper: (T, Int) -> Double): KDTreeNode<T> {
val root = KDTreeNode<T>(dimensions, mapper)
fun <T> buildTreeTask(
node: KDTreeNode<T>,
items: MutableList<T>,
dimensions: Int,
levels: Int,
mapper: (T, Int) -> Double
): KDTreeNode<T> {
if (items.size > 0) {
val dimension = levels % dimensions
val values = ArrayList<T>()
for (item in items) {
values.add(item)
}
node.dimension = dimension
val median = selectNth(items, items.size / 2) { mapper(it, dimension) }
val leftItems = mutableListOf<T>()
val rightItems = mutableListOf<T>()
node.median = mapper(median, dimension)
node.item = median
for (item in items) {
if (item === median) {
continue
}
if (mapper(item, dimension) < node.median) {
leftItems.add(item)
} else {
rightItems.add(item)
}
}
// validate split
if (leftItems.size + rightItems.size + 1 != items.size) {
throw IllegalStateException("left: ${leftItems.size}, right: ${rightItems.size}, items: ${items.size}")
}
if (leftItems.size > 0) {
node.children[0] = KDTreeNode(dimensions, mapper)
node.children[0]?.let {
it.parent = node
buildTreeTask(it, leftItems, dimensions, levels + 1, mapper)
}
}
if (rightItems.size > 0) {
node.children[1] = KDTreeNode(dimensions, mapper)
node.children[1]?.let {
it.parent = node
buildTreeTask(it, rightItems, dimensions, levels + 1, mapper)
}
}
}
return node
}
buildTreeTask(root, items, dimensions, 0, mapper)
return root
}

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@@ -0,0 +1,80 @@
@file:JvmName("KDTreeJvmKt")
package org.openrndr.extra.kdtree
import kotlinx.coroutines.*
@OptIn(DelicateCoroutinesApi::class)
actual fun <T> buildKDTree(items: MutableList<T>, dimensions: Int, mapper: (T, Int) -> Double): KDTreeNode<T> {
val root = KDTreeNode<T>(dimensions, mapper)
fun <T> buildTreeTask(
scope: CoroutineScope,
node: KDTreeNode<T>,
items: MutableList<T>,
dimensions: Int,
levels: Int,
mapper: (T, Int) -> Double
): KDTreeNode<T> {
if (items.size > 0) {
val dimension = levels % dimensions
val values = ArrayList<T>()
for (item in items) {
values.add(item)
}
node.dimension = dimension
val median = selectNth(items, items.size / 2) { mapper(it, dimension) }
val leftItems = mutableListOf<T>()
val rightItems = mutableListOf<T>()
node.median = mapper(median, dimension)
node.item = median
for (item in items) {
if (item === median) {
continue
}
if (mapper(item, dimension) < node.median) {
leftItems.add(item)
} else {
rightItems.add(item)
}
}
// validate split
if (leftItems.size + rightItems.size + 1 != items.size) {
throw IllegalStateException("left: ${leftItems.size}, right: ${rightItems.size}, items: ${items.size}")
}
if (leftItems.size > 0) {
node.children[0] = KDTreeNode(dimensions, mapper)
node.children[0]?.let {
it.parent = node
scope.launch {
buildTreeTask(scope, it, leftItems, dimensions, levels + 1, mapper)
}
}
}
if (rightItems.size > 0) {
node.children[1] = KDTreeNode(dimensions, mapper)
node.children[1]?.let {
it.parent = node
scope.launch {
buildTreeTask(scope, it, rightItems, dimensions, levels + 1, mapper)
}
}
}
}
return node
}
val job = GlobalScope.launch {
buildTreeTask(this, root, items, dimensions, 0, mapper)
}
runBlocking {
job.join()
}
return root
}